Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.13□□□□□ -0.31
Pif1Q80SX8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gm6916-202ENSMUST00000205523 195 ntBASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.13□□□□□ -0.31
Pif1Q80SX8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.13□□□□□ -0.31
Pif1Q80SX8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pif1Q80SX8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Mir6392-201ENSMUST00000184924 108 ntBASIC13.12□□□□□ -0.31
Pif1Q80SX8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.12□□□□□ -0.31
Pif1Q80SX8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Gm25857-201ENSMUST00000082788 129 ntBASIC13.12□□□□□ -0.31
Pif1Q80SX8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.12□□□□□ -0.31
Pif1Q80SX8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pif1Q80SX8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gm12585-201ENSMUST00000117307 290 ntBASIC13.11□□□□□ -0.31
Pif1Q80SX8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gm33320-201ENSMUST00000192232 530 ntBASIC13.11□□□□□ -0.31
Pif1Q80SX8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.11□□□□□ -0.31
Pif1Q80SX8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms