Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn4bQ7M729 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn4bQ7M729 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn4bQ7M729 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Scn4bQ7M729 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn4bQ7M729 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn4bQ7M729 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Gm13015-201ENSMUST00000118674 204 ntBASIC13.83□□□□□ -0.2
Scn4bQ7M729 Gm12882-201ENSMUST00000121696 517 ntBASIC13.83□□□□□ -0.2
Scn4bQ7M729 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.83□□□□□ -0.2
Scn4bQ7M729 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn4bQ7M729 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.82□□□□□ -0.2
Scn4bQ7M729 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Gm8584-201ENSMUST00000171982 758 ntBASIC13.82□□□□□ -0.2
Scn4bQ7M729 Gm18049-201ENSMUST00000208909 581 ntBASIC13.82□□□□□ -0.2
Scn4bQ7M729 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn4bQ7M729 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.81□□□□□ -0.2
Scn4bQ7M729 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.81□□□□□ -0.2
Scn4bQ7M729 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gm43474-201ENSMUST00000196415 774 ntBASIC13.81□□□□□ -0.2
Scn4bQ7M729 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gm5867-201ENSMUST00000063197 592 ntBASIC13.81□□□□□ -0.2
Scn4bQ7M729 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms