Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm16397-201ENSMUST00000122201 494 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.93□□□□□ -0.5
Rif1Q6PR54 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.93□□□□□ -0.5
Rif1Q6PR54 Gm21769-201ENSMUST00000211922 111 ntBASIC11.93□□□□□ -0.5
Rif1Q6PR54 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rif1Q6PR54 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm5070-201ENSMUST00000177599 862 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 Mir6958-201ENSMUST00000184207 73 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm7600-201ENSMUST00000209657 785 ntBASIC11.92□□□□□ -0.5
Rif1Q6PR54 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rif1Q6PR54 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm15240-201ENSMUST00000118156 720 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm15376-201ENSMUST00000122258 783 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms