Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rad54bQ6PFE3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm2810-201ENSMUST00000118681 990 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm27741-201ENSMUST00000185060 237 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm29310-201ENSMUST00000185468 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21825-201ENSMUST00000185728 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm29109-201ENSMUST00000185895 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21896-201ENSMUST00000186520 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21873-201ENSMUST00000186728 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21794-201ENSMUST00000187056 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21880-201ENSMUST00000187275 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21826-201ENSMUST00000187451 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21198-201ENSMUST00000188393 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21749-201ENSMUST00000189343 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21901-201ENSMUST00000189568 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm29424-201ENSMUST00000189716 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm28599-201ENSMUST00000189838 694 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21867-201ENSMUST00000189917 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm29269-201ENSMUST00000190087 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21722-201ENSMUST00000190153 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm28423-201ENSMUST00000190701 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21899-201ENSMUST00000190745 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21910-201ENSMUST00000191163 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21849-201ENSMUST00000191571 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm28678-201ENSMUST00000191593 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm20910-201ENSMUST00000193268 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm21871-201ENSMUST00000194621 696 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rad54bQ6PFE3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.25□□□□□ -0.13
Rad54bQ6PFE3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms