Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf220Q6PDX6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rnf220Q6PDX6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rnf220Q6PDX6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm14859-201ENSMUST00000117752 357 ntBASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm8318-201ENSMUST00000182954 872 ntBASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf220Q6PDX6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf220Q6PDX6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms