Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Commd3Q63829 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Commd3Q63829 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.8□□□□□ -0.52
Commd3Q63829 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.8□□□□□ -0.52
Commd3Q63829 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Gm27646-201ENSMUST00000183989 110 ntBASIC11.8□□□□□ -0.52
Commd3Q63829 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.8□□□□□ -0.52
Commd3Q63829 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Commd3Q63829 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.8□□□□□ -0.52
Commd3Q63829 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Commd3Q63829 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.8□□□□□ -0.52
Commd3Q63829 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Commd3Q63829 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Commd3Q63829 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Gm6296-201ENSMUST00000222599 943 ntBASIC11.79□□□□□ -0.52
Commd3Q63829 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.79□□□□□ -0.52
Commd3Q63829 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Commd3Q63829 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms