Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc2Q61850 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc2Q61850 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Foxc2Q61850 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc2Q61850 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.28□□□□□ -0.6
Foxc2Q61850 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc2Q61850 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc2Q61850 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Foxc2Q61850 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc2Q61850 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc2Q61850 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Foxc2Q61850 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Foxc2Q61850 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc2Q61850 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc2Q61850 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Foxc2Q61850 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Gm11543-201ENSMUST00000120758 370 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Gm18057-201ENSMUST00000208220 503 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Foxc2Q61850 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Paupar-201ENSMUST00000194826 3482 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.27□□□□□ -0.61
Foxc2Q61850 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc2Q61850 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Foxc2Q61850 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Foxc2Q61850 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.26□□□□□ -0.61
Foxc2Q61850 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Foxc2Q61850 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.25□□□□□ -0.61
Foxc2Q61850 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Foxc2Q61850 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Foxc2Q61850 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms