Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sox17Q61473 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sox17Q61473 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.33□□□□□ -0.28
Sox17Q61473 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox17Q61473 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Sox17Q61473 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Sox17Q61473 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox17Q61473 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox17Q61473 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Gm7222-201ENSMUST00000117512 906 ntBASIC13.32□□□□□ -0.28
Sox17Q61473 Gm15173-201ENSMUST00000122049 433 ntBASIC13.32□□□□□ -0.28
Sox17Q61473 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox17Q61473 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.32□□□□□ -0.28
Sox17Q61473 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Sox17Q61473 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.32□□□□□ -0.28
Sox17Q61473 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sox17Q61473 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox17Q61473 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox17Q61473 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox17Q61473 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Sox17Q61473 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox17Q61473 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox17Q61473 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox17Q61473 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.31□□□□□ -0.28
Sox17Q61473 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox17Q61473 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms