Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Atf3Q60765 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atf3Q60765 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.84■□□□□ 0.61
Atf3Q60765 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atf3Q60765 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf3Q60765 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf3Q60765 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Mir686-201ENSMUST00000102174 109 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC18.83■□□□□ 0.6
Atf3Q60765 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Gm25927-201ENSMUST00000175058 117 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Gm26927-201ENSMUST00000182385 965 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC18.83■□□□□ 0.6
Atf3Q60765 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Gm24447-201ENSMUST00000083977 338 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf3Q60765 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Atf3Q60765 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Atf3Q60765 Gm44207-201ENSMUST00000204568 1424 ntBASIC18.83■□□□□ 0.6
Atf3Q60765 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Atf3Q60765 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.82■□□□□ 0.6
Atf3Q60765 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Atf3Q60765 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Gm14381-201ENSMUST00000122105 414 ntBASIC18.82■□□□□ 0.6
Atf3Q60765 Gm2383-201ENSMUST00000181461 807 ntBASIC18.82■□□□□ 0.6
Atf3Q60765 Gm10608-202ENSMUST00000213924 676 ntBASIC18.82■□□□□ 0.6
Atf3Q60765 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.82■□□□□ 0.6
Atf3Q60765 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atf3Q60765 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf3Q60765 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Gm24255-201ENSMUST00000104481 128 ntBASIC18.81■□□□□ 0.6
Atf3Q60765 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC18.81■□□□□ 0.6
Atf3Q60765 Gm13369-201ENSMUST00000119442 987 ntBASIC18.81■□□□□ 0.6
Atf3Q60765 Gm12997-201ENSMUST00000120207 640 ntBASIC18.81■□□□□ 0.6
Atf3Q60765 Gm12176-201ENSMUST00000121420 875 ntBASIC18.81■□□□□ 0.6
Atf3Q60765 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.81■□□□□ 0.6
Atf3Q60765 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Atf3Q60765 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atf3Q60765 Gm5363-201ENSMUST00000211927 938 ntBASIC18.81■□□□□ 0.6
Atf3Q60765 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf3Q60765 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.81■□□□□ 0.6
Atf3Q60765 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.81■□□□□ 0.6
Atf3Q60765 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.8■□□□□ 0.6
Atf3Q60765 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.8■□□□□ 0.6
Atf3Q60765 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf3Q60765 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms