Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.64□□□□□ -0.23
ClpbQ60649 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.64□□□□□ -0.23
ClpbQ60649 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ClpbQ60649 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClpbQ60649 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.64□□□□□ -0.23
ClpbQ60649 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.64□□□□□ -0.23
ClpbQ60649 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.64□□□□□ -0.23
ClpbQ60649 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.64□□□□□ -0.23
ClpbQ60649 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClpbQ60649 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ClpbQ60649 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ClpbQ60649 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.63□□□□□ -0.23
ClpbQ60649 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ClpbQ60649 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Gm9182-201ENSMUST00000217829 639 ntBASIC13.63□□□□□ -0.23
ClpbQ60649 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.63□□□□□ -0.23
ClpbQ60649 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.63□□□□□ -0.23
ClpbQ60649 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClpbQ60649 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ClpbQ60649 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.63□□□□□ -0.23
ClpbQ60649 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClpbQ60649 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.62□□□□□ -0.23
ClpbQ60649 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.62□□□□□ -0.23
ClpbQ60649 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.62□□□□□ -0.23
ClpbQ60649 Gm8410-201ENSMUST00000117225 605 ntBASIC13.62□□□□□ -0.23
ClpbQ60649 Gm14042-201ENSMUST00000120139 833 ntBASIC13.62□□□□□ -0.23
ClpbQ60649 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ClpbQ60649 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.62□□□□□ -0.23
ClpbQ60649 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.62□□□□□ -0.23
ClpbQ60649 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ClpbQ60649 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms