Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Gm14722-201ENSMUST00000118943 689 ntBASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trav3-3Q5R1C3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Gm7367-201ENSMUST00000057611 492 ntBASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav3-3Q5R1C3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-3Q5R1C3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-3Q5R1C3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-3Q5R1C3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav3-3Q5R1C3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Gm10252-201ENSMUST00000209541 832 ntBASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-3Q5R1C3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms