Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Rc3h1Q4VGL6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rc3h1Q4VGL6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm12138-201ENSMUST00000122180 951 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm45668-201ENSMUST00000211271 493 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm18027-201ENSMUST00000218947 619 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.36■□□□□ 0.21
Rc3h1Q4VGL6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Gm37917-201ENSMUST00000194711 392 ntBASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Gm6745-201ENSMUST00000199216 526 ntBASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rc3h1Q4VGL6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms