Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Gm12485-201ENSMUST00000119641 291 ntBASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fam196aQ3USH1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gm43138-201ENSMUST00000199123 708 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gm8598-201ENSMUST00000221184 836 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.17□□□□□ -0.14
Fam196aQ3USH1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.17□□□□□ -0.14
Fam196aQ3USH1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Gm12241-201ENSMUST00000118330 726 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Gm27320-201ENSMUST00000184892 109 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Gm27772-201ENSMUST00000184900 187 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Gm6334-201ENSMUST00000207083 228 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Nsd1-205ENSMUST00000224693 852 ntBASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fam196aQ3USH1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fam196aQ3USH1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms