Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fndc4Q3TR08 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gm5364-201ENSMUST00000216789 889 ntBASIC12.12□□□□□ -0.47
Fndc4Q3TR08 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fndc4Q3TR08 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fndc4Q3TR08 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Gm13597-201ENSMUST00000121239 375 ntBASIC12.1□□□□□ -0.47
Fndc4Q3TR08 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms