Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ptchd3Q0EEE2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Gm14140-201ENSMUST00000119999 995 ntBASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Gm1401-201ENSMUST00000122048 772 ntBASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ptchd3Q0EEE2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ptchd3Q0EEE2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Psmb5-202ENSMUST00000227257 622 ntBASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ptchd3Q0EEE2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.69□□□□□ -0.22
Ptchd3Q0EEE2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms