Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Atf4Q06507 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf4Q06507 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Atf4Q06507 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Atf4Q06507 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Gm15626-201ENSMUST00000117478 868 ntBASIC13.62□□□□□ -0.23
Atf4Q06507 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.62□□□□□ -0.23
Atf4Q06507 Gm44548-201ENSMUST00000208929 192 ntBASIC13.62□□□□□ -0.23
Atf4Q06507 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf4Q06507 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.62□□□□□ -0.23
Atf4Q06507 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.62□□□□□ -0.23
Atf4Q06507 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Atf4Q06507 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf4Q06507 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Atf4Q06507 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf4Q06507 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Atf4Q06507 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Atf4Q06507 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.61□□□□□ -0.23
Atf4Q06507 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.61□□□□□ -0.23
Atf4Q06507 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC13.61□□□□□ -0.23
Atf4Q06507 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.61□□□□□ -0.23
Atf4Q06507 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.61□□□□□ -0.23
Atf4Q06507 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm19212-201ENSMUST00000216642 862 ntBASIC13.61□□□□□ -0.23
Atf4Q06507 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.61□□□□□ -0.23
Atf4Q06507 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Atf4Q06507 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Atf4Q06507 Gm44286-201ENSMUST00000204098 1487 ntBASIC13.61□□□□□ -0.23
Atf4Q06507 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf4Q06507 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf4Q06507 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.6□□□□□ -0.23
Atf4Q06507 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.6□□□□□ -0.23
Atf4Q06507 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Atf4Q06507 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.6□□□□□ -0.23
Atf4Q06507 Gm18766-201ENSMUST00000189811 808 ntBASIC13.6□□□□□ -0.23
Atf4Q06507 Gm45276-201ENSMUST00000209549 1086 ntBASIC13.6□□□□□ -0.23
Atf4Q06507 Gm7441-201ENSMUST00000220697 1074 ntBASIC13.6□□□□□ -0.23
Atf4Q06507 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf4Q06507 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms