Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.79□□□□□ -0.2
Msx2Q03358 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Msx2Q03358 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Msx2Q03358 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.79□□□□□ -0.2
Msx2Q03358 Gm14042-201ENSMUST00000120139 833 ntBASIC13.79□□□□□ -0.2
Msx2Q03358 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msx2Q03358 Gm15173-201ENSMUST00000122049 433 ntBASIC13.79□□□□□ -0.2
Msx2Q03358 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.79□□□□□ -0.2
Msx2Q03358 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.79□□□□□ -0.2
Msx2Q03358 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msx2Q03358 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Msx2Q03358 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.79□□□□□ -0.2
Msx2Q03358 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Msx2Q03358 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Msx2Q03358 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.79□□□□□ -0.2
Msx2Q03358 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx2Q03358 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Msx2Q03358 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Msx2Q03358 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Gm7222-201ENSMUST00000117512 906 ntBASIC13.78□□□□□ -0.2
Msx2Q03358 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.78□□□□□ -0.2
Msx2Q03358 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.78□□□□□ -0.2
Msx2Q03358 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.78□□□□□ -0.2
Msx2Q03358 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Msx2Q03358 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Msx2Q03358 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msx2Q03358 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msx2Q03358 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msx2Q03358 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msx2Q03358 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Msx2Q03358 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Msx2Q03358 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.77□□□□□ -0.21
Msx2Q03358 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Msx2Q03358 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Msx2Q03358 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms