Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.99□□□□□ -0.33
Scn1bP97952 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.99□□□□□ -0.33
Scn1bP97952 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Scn1bP97952 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Scn1bP97952 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.99□□□□□ -0.33
Scn1bP97952 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn1bP97952 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.99□□□□□ -0.33
Scn1bP97952 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1bP97952 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn1bP97952 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn1bP97952 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Scn1bP97952 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn1bP97952 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn1bP97952 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1bP97952 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scn1bP97952 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scn1bP97952 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1bP97952 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.97□□□□□ -0.33
Scn1bP97952 Gm27357-201ENSMUST00000183754 135 ntBASIC12.97□□□□□ -0.33
Scn1bP97952 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.97□□□□□ -0.33
Scn1bP97952 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scn1bP97952 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.97□□□□□ -0.33
Scn1bP97952 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1bP97952 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1bP97952 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Scn1bP97952 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scn1bP97952 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Gm15372-201ENSMUST00000120729 834 ntBASIC12.96□□□□□ -0.33
Scn1bP97952 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.96□□□□□ -0.33
Scn1bP97952 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.96□□□□□ -0.33
Scn1bP97952 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scn1bP97952 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.96□□□□□ -0.33
Scn1bP97952 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Scn1bP97952 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn1bP97952 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms