Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ldb1P70662 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb1P70662 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb1P70662 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb1P70662 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ldb1P70662 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.15□□□□□ -0.15
Ldb1P70662 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ldb1P70662 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ldb1P70662 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ldb1P70662 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Gm13823-201ENSMUST00000119930 345 ntBASIC14.14□□□□□ -0.15
Ldb1P70662 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Gm43575-201ENSMUST00000196420 516 ntBASIC14.14□□□□□ -0.15
Ldb1P70662 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.14□□□□□ -0.15
Ldb1P70662 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.14□□□□□ -0.15
Ldb1P70662 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.14□□□□□ -0.15
Ldb1P70662 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ldb1P70662 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ldb1P70662 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Gm23935-201ENSMUST00000102303 57 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Gm24270-201ENSMUST00000102326 57 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ldb1P70662 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Gm24245-201ENSMUST00000157318 57 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Gm29541-201ENSMUST00000191351 678 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Gm37935-201ENSMUST00000192012 982 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 Gm2756-201ENSMUST00000195851 400 ntBASIC14.13□□□□□ -0.15
Ldb1P70662 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.13□□□□□ -0.15
Ldb1P70662 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ldb1P70662 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ldb1P70662 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.12□□□□□ -0.15
Ldb1P70662 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ldb1P70662 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Gm6736-201ENSMUST00000166583 948 ntBASIC14.12□□□□□ -0.15
Ldb1P70662 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Gm18049-201ENSMUST00000208909 581 ntBASIC14.12□□□□□ -0.15
Ldb1P70662 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.12□□□□□ -0.15
Ldb1P70662 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms