Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Gm11405-201ENSMUST00000118689 1556 ntBASIC19.61■□□□□ 0.73
Stra8P70278 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra8P70278 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stra8P70278 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.6■□□□□ 0.73
Stra8P70278 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
Stra8P70278 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.6■□□□□ 0.73
Stra8P70278 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Stra8P70278 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Stra8P70278 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stra8P70278 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Stra8P70278 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Gm11594-201ENSMUST00000122313 162 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.59■□□□□ 0.73
Stra8P70278 Gm45747-201ENSMUST00000212203 999 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Thap2-203ENSMUST00000218989 527 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Stra8P70278 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Gm10154-201ENSMUST00000084445 354 ntBASIC19.59■□□□□ 0.73
Stra8P70278 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Stra8P70278 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Stra8P70278 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Stra8P70278 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Stra8P70278 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stra8P70278 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Stra8P70278 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC19.58■□□□□ 0.73
Stra8P70278 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stra8P70278 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Stra8P70278 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stra8P70278 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Stra8P70278 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Stra8P70278 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.58■□□□□ 0.73
Stra8P70278 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Stra8P70278 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stra8P70278 Gm16198-201ENSMUST00000118766 670 ntBASIC19.58■□□□□ 0.72
Stra8P70278 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stra8P70278 Mir8117-201ENSMUST00000184773 107 ntBASIC19.58■□□□□ 0.72
Stra8P70278 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.58■□□□□ 0.72
Stra8P70278 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stra8P70278 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stra8P70278 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stra8P70278 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Stra8P70278 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC19.58■□□□□ 0.72
Stra8P70278 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Stra8P70278 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stra8P70278 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Stra8P70278 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Stra8P70278 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.57■□□□□ 0.72
Stra8P70278 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.57■□□□□ 0.72
Stra8P70278 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stra8P70278 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.57■□□□□ 0.72
Stra8P70278 Gm27301-201ENSMUST00000184012 127 ntBASIC19.57■□□□□ 0.72
Stra8P70278 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.57■□□□□ 0.72
Stra8P70278 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stra8P70278 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Stra8P70278 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stra8P70278 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stra8P70278 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms