Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lsm3P62311 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lsm3P62311 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lsm3P62311 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm15794-201ENSMUST00000120182 631 ntBASIC12.92□□□□□ -0.34
Lsm3P62311 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm43799-201ENSMUST00000201845 579 ntBASIC12.92□□□□□ -0.34
Lsm3P62311 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.92□□□□□ -0.34
Lsm3P62311 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lsm3P62311 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.92□□□□□ -0.34
Lsm3P62311 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lsm3P62311 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Lsm3P62311 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.91□□□□□ -0.34
Lsm3P62311 Rprl3-201ENSMUST00000157400 290 ntBASIC12.91□□□□□ -0.34
Lsm3P62311 Gm6345-202ENSMUST00000180900 204 ntBASIC12.91□□□□□ -0.34
Lsm3P62311 Gm18041-201ENSMUST00000218210 618 ntBASIC12.91□□□□□ -0.34
Lsm3P62311 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.91□□□□□ -0.34
Lsm3P62311 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lsm3P62311 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lsm3P62311 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.9□□□□□ -0.34
Lsm3P62311 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.9□□□□□ -0.34
Lsm3P62311 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lsm3P62311 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms