Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b6P59708 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm25925-201ENSMUST00000158314 306 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm4899-201ENSMUST00000178708 719 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm43514-201ENSMUST00000198852 424 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.6□□□□□ -0.39
Sf3b6P59708 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b6P59708 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sf3b6P59708 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sf3b6P59708 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.59□□□□□ -0.39
Sf3b6P59708 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Gm15590-201ENSMUST00000078419 552 ntBASIC12.59□□□□□ -0.39
Sf3b6P59708 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b6P59708 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b6P59708 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b6P59708 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b6P59708 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b6P59708 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b6P59708 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.58□□□□□ -0.4
Sf3b6P59708 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b6P59708 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms