Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tpm1P58771 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpm1P58771 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.84■□□□□ 0.13
Tpm1P58771 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.84■□□□□ 0.13
Tpm1P58771 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.84■□□□□ 0.13
Tpm1P58771 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.84■□□□□ 0.13
Tpm1P58771 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.84■□□□□ 0.13
Tpm1P58771 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tpm1P58771 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
Tpm1P58771 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Tpm1P58771 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tpm1P58771 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Gm9182-201ENSMUST00000217829 639 ntBASIC15.83■□□□□ 0.12
Tpm1P58771 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Tpm1P58771 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Tpm1P58771 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tpm1P58771 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.82■□□□□ 0.12
Tpm1P58771 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tpm1P58771 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tpm1P58771 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tpm1P58771 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms