Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atxn1P54254 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.09□□□□□ -0.15
Atxn1P54254 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.09□□□□□ -0.15
Atxn1P54254 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atxn1P54254 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.08□□□□□ -0.15
Atxn1P54254 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Atxn1P54254 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Atxn1P54254 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atxn1P54254 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Atxn1P54254 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.08□□□□□ -0.16
Atxn1P54254 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Gm13226-201ENSMUST00000117838 404 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Gm5479-201ENSMUST00000160578 435 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Gm43179-201ENSMUST00000198797 275 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.08□□□□□ -0.16
Atxn1P54254 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Atxn1P54254 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.08□□□□□ -0.16
Atxn1P54254 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.08□□□□□ -0.16
Atxn1P54254 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Atxn1P54254 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Atxn1P54254 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atxn1P54254 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Gm37424-201ENSMUST00000191727 561 ntBASIC14.07□□□□□ -0.16
Atxn1P54254 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.07□□□□□ -0.16
Atxn1P54254 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.07□□□□□ -0.16
Atxn1P54254 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.07□□□□□ -0.16
Atxn1P54254 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.07□□□□□ -0.16
Atxn1P54254 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Atxn1P54254 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.07□□□□□ -0.16
Atxn1P54254 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Atxn1P54254 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Atxn1P54254 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Atxn1P54254 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Atxn1P54254 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
Atxn1P54254 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Atxn1P54254 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.06□□□□□ -0.16
Atxn1P54254 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Atxn1P54254 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Atxn1P54254 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Atxn1P54254 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Atxn1P54254 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.06□□□□□ -0.16
Atxn1P54254 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Atxn1P54254 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Atxn1P54254 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.06□□□□□ -0.16
Atxn1P54254 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms