Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox3P53784 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox3P53784 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox3P53784 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox3P53784 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox3P53784 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox3P53784 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Gm16026-204ENSMUST00000162652 683 ntBASIC13.61□□□□□ -0.23
Sox3P53784 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Gm8318-201ENSMUST00000182954 872 ntBASIC13.61□□□□□ -0.23
Sox3P53784 AY702102-202ENSMUST00000194651 1173 ntBASIC13.61□□□□□ -0.23
Sox3P53784 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox3P53784 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox3P53784 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox3P53784 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.61□□□□□ -0.23
Sox3P53784 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox3P53784 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox3P53784 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sox3P53784 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Sox3P53784 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Gm12091-201ENSMUST00000146791 830 ntBASIC13.6□□□□□ -0.23
Sox3P53784 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.6□□□□□ -0.23
Sox3P53784 Gm45668-201ENSMUST00000211271 493 ntBASIC13.6□□□□□ -0.23
Sox3P53784 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.6□□□□□ -0.23
Sox3P53784 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox3P53784 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox3P53784 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Sox3P53784 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Sox3P53784 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox3P53784 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms