Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox1P53783 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox1P53783 Gm4271-201ENSMUST00000174444 973 ntBASIC14.41□□□□□ -0.1
Sox1P53783 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Sox1P53783 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox1P53783 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.41□□□□□ -0.1
Sox1P53783 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox1P53783 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox1P53783 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox1P53783 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox1P53783 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox1P53783 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox1P53783 Gm12566-201ENSMUST00000121479 359 ntBASIC14.4□□□□□ -0.1
Sox1P53783 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.4□□□□□ -0.1
Sox1P53783 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox1P53783 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Sox1P53783 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox1P53783 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox1P53783 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox1P53783 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Sox1P53783 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sox1P53783 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Sox1P53783 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox1P53783 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox1P53783 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms