Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lbx1P52955 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lbx1P52955 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lbx1P52955 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.68□□□□□ -0.22
Lbx1P52955 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.68□□□□□ -0.22
Lbx1P52955 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.68□□□□□ -0.22
Lbx1P52955 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.68□□□□□ -0.22
Lbx1P52955 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.68□□□□□ -0.22
Lbx1P52955 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.68□□□□□ -0.22
Lbx1P52955 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.68□□□□□ -0.22
Lbx1P52955 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lbx1P52955 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Snora73a-201ENSMUST00000082453 205 ntBASIC13.68□□□□□ -0.22
Lbx1P52955 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 BC001981-202ENSMUST00000191393 1545 ntBASIC13.68□□□□□ -0.22
Lbx1P52955 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
Lbx1P52955 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
Lbx1P52955 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Lbx1P52955 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.68□□□□□ -0.22
Lbx1P52955 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lbx1P52955 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lbx1P52955 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Lbx1P52955 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lbx1P52955 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 Gm13786-201ENSMUST00000122371 333 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.67□□□□□ -0.22
Lbx1P52955 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Gm45186-201ENSMUST00000206874 478 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lbx1P52955 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Lbx1P52955 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lbx1P52955 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.67□□□□□ -0.22
Lbx1P52955 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms