Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm13418-201ENSMUST00000119097 944 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm8584-201ENSMUST00000171982 758 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm17971-201ENSMUST00000190239 806 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.77□□□□□ -0.53
Nkx2-1P50220 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx2-1P50220 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm25990-201ENSMUST00000102440 86 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44357-201ENSMUST00000195897 142 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm19658-201ENSMUST00000196231 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44367-201ENSMUST00000196836 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44350-201ENSMUST00000197197 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44390-201ENSMUST00000197533 144 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm6089-201ENSMUST00000197666 938 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44313-201ENSMUST00000198018 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44486-201ENSMUST00000198508 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44314-201ENSMUST00000199263 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44394-201ENSMUST00000199558 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44484-201ENSMUST00000199873 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44466-201ENSMUST00000200264 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44359-201ENSMUST00000200671 138 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm6376-201ENSMUST00000209407 580 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm7787-201ENSMUST00000216858 688 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm10819-201ENSMUST00000099988 561 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.76□□□□□ -0.53
Nkx2-1P50220 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx2-1P50220 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Gm7222-201ENSMUST00000117512 906 ntBASIC11.75□□□□□ -0.53
Nkx2-1P50220 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx2-1P50220 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms