Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Xcl1P47993 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC9.19□□□□□ -0.94
Xcl1P47993 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Xcl1P47993 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC9.19□□□□□ -0.94
Xcl1P47993 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.19□□□□□ -0.94
Xcl1P47993 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC9.19□□□□□ -0.94
Xcl1P47993 Appbp2os-202ENSMUST00000206972 447 ntBASIC9.19□□□□□ -0.94
Xcl1P47993 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 AC159093.1-201ENSMUST00000227779 380 ntBASIC9.19□□□□□ -0.94
Xcl1P47993 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.19□□□□□ -0.94
Xcl1P47993 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Xcl1P47993 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm11249-201ENSMUST00000117071 859 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Gm27454-201ENSMUST00000185090 204 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Gm43034-201ENSMUST00000198678 1364 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm44878-201ENSMUST00000205812 1295 ntBASIC9.18□□□□□ -0.94
Xcl1P47993 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Xcl1P47993 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
Xcl1P47993 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Xcl1P47993 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Xcl1P47993 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC9.17□□□□□ -0.94
Xcl1P47993 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Xcl1P47993 Gm37133-201ENSMUST00000192705 1922 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Xcl1P47993 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.17□□□□□ -0.94
Xcl1P47993 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Xcl1P47993 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Xcl1P47993 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms