Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.14□□□□□ -0.15
LdlrP35951 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LdlrP35951 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.13□□□□□ -0.15
LdlrP35951 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.13□□□□□ -0.15
LdlrP35951 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LdlrP35951 Gm8584-201ENSMUST00000171982 758 ntBASIC14.13□□□□□ -0.15
LdlrP35951 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LdlrP35951 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.13□□□□□ -0.15
LdlrP35951 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.13□□□□□ -0.15
LdlrP35951 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LdlrP35951 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.13□□□□□ -0.15
LdlrP35951 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.13□□□□□ -0.15
LdlrP35951 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LdlrP35951 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LdlrP35951 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.12□□□□□ -0.15
LdlrP35951 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Gm27301-201ENSMUST00000184012 127 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Mir7023-201ENSMUST00000185093 64 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gm2272-201ENSMUST00000194903 582 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gm20949-201ENSMUST00000206478 952 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gm45747-201ENSMUST00000212203 999 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gm9182-201ENSMUST00000217829 639 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.12□□□□□ -0.15
LdlrP35951 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.12□□□□□ -0.15
LdlrP35951 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LdlrP35951 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LdlrP35951 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LdlrP35951 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.11□□□□□ -0.15
LdlrP35951 Gm13365-201ENSMUST00000121188 973 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LdlrP35951 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LdlrP35951 Gm5177-201ENSMUST00000183092 997 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.11□□□□□ -0.15
LdlrP35951 Gm37230-201ENSMUST00000194491 818 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Gm44335-201ENSMUST00000196879 141 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Gm44297-201ENSMUST00000198304 141 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Gm44346-201ENSMUST00000198851 141 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms