Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rom1P32958 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Rom1P32958 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Gm7222-201ENSMUST00000117512 906 ntBASIC11.22□□□□□ -0.61
Rom1P32958 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.22□□□□□ -0.61
Rom1P32958 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.22□□□□□ -0.61
Rom1P32958 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Rom1P32958 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.22□□□□□ -0.61
Rom1P32958 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Gm27357-201ENSMUST00000183754 135 ntBASIC11.22□□□□□ -0.61
Rom1P32958 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.22□□□□□ -0.61
Rom1P32958 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.22□□□□□ -0.61
Rom1P32958 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rom1P32958 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.21□□□□□ -0.61
Rom1P32958 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.21□□□□□ -0.61
Rom1P32958 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.21□□□□□ -0.61
Rom1P32958 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.21□□□□□ -0.61
Rom1P32958 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.21□□□□□ -0.61
Rom1P32958 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rom1P32958 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.21□□□□□ -0.62
Rom1P32958 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.21□□□□□ -0.62
Rom1P32958 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rom1P32958 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Rom1P32958 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Rom1P32958 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.2□□□□□ -0.62
Rom1P32958 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.2□□□□□ -0.62
Rom1P32958 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.2□□□□□ -0.62
Rom1P32958 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rom1P32958 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.2□□□□□ -0.62
Rom1P32958 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.2□□□□□ -0.62
Rom1P32958 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.2□□□□□ -0.62
Rom1P32958 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Rom1P32958 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms