Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd28P31041 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.52□□□□□ -0.4
Cd28P31041 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd28P31041 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cd28P31041 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Gm17807-201ENSMUST00000186869 298 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.52□□□□□ -0.41
Cd28P31041 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.52□□□□□ -0.41
Cd28P31041 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cd28P31041 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.52□□□□□ -0.41
Cd28P31041 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cd28P31041 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Grk6-205ENSMUST00000224653 2976 ntBASIC12.52□□□□□ -0.41
Cd28P31041 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd28P31041 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd28P31041 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cd28P31041 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cd28P31041 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.51□□□□□ -0.41
Cd28P31041 Gm45167-201ENSMUST00000208007 322 ntBASIC12.51□□□□□ -0.41
Cd28P31041 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cd28P31041 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cd28P31041 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd28P31041 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd28P31041 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.5□□□□□ -0.41
Cd28P31041 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cd28P31041 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.5□□□□□ -0.41
Cd28P31041 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.5□□□□□ -0.41
Cd28P31041 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd28P31041 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.5□□□□□ -0.41
Cd28P31041 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms