Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.1□□□□□ -0.31
Nedd8P29595 Gm14042-201ENSMUST00000120139 833 ntBASIC13.1□□□□□ -0.31
Nedd8P29595 Gm12497-201ENSMUST00000138778 237 ntBASIC13.1□□□□□ -0.31
Nedd8P29595 Rprl3-201ENSMUST00000157400 290 ntBASIC13.1□□□□□ -0.31
Nedd8P29595 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nedd8P29595 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nedd8P29595 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nedd8P29595 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nedd8P29595 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.09□□□□□ -0.31
Nedd8P29595 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nedd8P29595 Gm37055-201ENSMUST00000191866 133 ntBASIC13.09□□□□□ -0.31
Nedd8P29595 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.09□□□□□ -0.31
Nedd8P29595 Gm43799-201ENSMUST00000201845 579 ntBASIC13.09□□□□□ -0.31
Nedd8P29595 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.09□□□□□ -0.31
Nedd8P29595 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nedd8P29595 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.08□□□□□ -0.31
Nedd8P29595 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nedd8P29595 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nedd8P29595 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nedd8P29595 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.08□□□□□ -0.32
Nedd8P29595 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Gm8520-201ENSMUST00000186517 868 ntBASIC13.08□□□□□ -0.32
Nedd8P29595 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Nedd8P29595 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.08□□□□□ -0.32
Nedd8P29595 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms