Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl6P27784 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ccl6P27784 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.09□□□□□ -0.63
Ccl6P27784 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl6P27784 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccl6P27784 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccl6P27784 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccl6P27784 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccl6P27784 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Gm13365-201ENSMUST00000121188 973 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.08□□□□□ -0.64
Ccl6P27784 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccl6P27784 Gm2213-201ENSMUST00000197485 688 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl6P27784 Gm18057-201ENSMUST00000208220 503 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ccl6P27784 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.08□□□□□ -0.64
Ccl6P27784 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Ccl6P27784 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccl6P27784 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccl6P27784 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl6P27784 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccl6P27784 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Ccl6P27784 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccl6P27784 Rprl2-201ENSMUST00000157150 290 ntBASIC11.07□□□□□ -0.64
Ccl6P27784 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccl6P27784 Gm27397-201ENSMUST00000184997 107 ntBASIC11.07□□□□□ -0.64
Ccl6P27784 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.07□□□□□ -0.64
Ccl6P27784 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Ccl6P27784 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl6P27784 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.07□□□□□ -0.64
Ccl6P27784 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl6P27784 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl6P27784 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl6P27784 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl6P27784 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl6P27784 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccl6P27784 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms