Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cd40P27512 Gm27618-201ENSMUST00000183671 60 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.85□□□□□ -0.35
Cd40P27512 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.85□□□□□ -0.35
Cd40P27512 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.85□□□□□ -0.35
Cd40P27512 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Shd-206ENSMUST00000225145 998 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cd40P27512 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cd40P27512 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.85□□□□□ -0.35
Cd40P27512 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cd40P27512 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.85□□□□□ -0.35
Cd40P27512 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd40P27512 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Gm14767-201ENSMUST00000121559 586 ntBASIC12.84□□□□□ -0.35
Cd40P27512 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cd40P27512 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cd40P27512 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.84□□□□□ -0.35
Cd40P27512 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cd40P27512 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.84□□□□□ -0.35
Cd40P27512 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cd40P27512 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd40P27512 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cd40P27512 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd40P27512 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd40P27512 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd40P27512 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd40P27512 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cd40P27512 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd40P27512 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd40P27512 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd40P27512 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cd40P27512 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.83□□□□□ -0.36
Cd40P27512 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.83□□□□□ -0.36
Cd40P27512 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Gm6916-202ENSMUST00000205523 195 ntBASIC12.83□□□□□ -0.36
Cd40P27512 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd40P27512 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Cd40P27512 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd40P27512 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd40P27512 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.83□□□□□ -0.36
Cd40P27512 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms