Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.15□□□□□ -0.3
Tnfrsf1bP25119 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Tnfrsf1bP25119 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Gm15957-201ENSMUST00000118893 974 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Gm14767-201ENSMUST00000121559 586 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Gm44344-201ENSMUST00000200287 129 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Gm46209-201ENSMUST00000217912 553 ntBASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfrsf1bP25119 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Gm15653-201ENSMUST00000119247 907 ntBASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1bP25119 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf1bP25119 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms