Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Clk1P22518 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Gm6973-201ENSMUST00000117080 721 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.26□□□□□ -0.29
Clk1P22518 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Gm5479-201ENSMUST00000160578 435 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Gm20553-201ENSMUST00000204205 844 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Gm45098-201ENSMUST00000207179 657 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.26□□□□□ -0.29
Clk1P22518 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clk1P22518 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clk1P22518 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clk1P22518 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Clk1P22518 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.25□□□□□ -0.29
Clk1P22518 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Rprl2-201ENSMUST00000157150 290 ntBASIC13.25□□□□□ -0.29
Clk1P22518 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.25□□□□□ -0.29
Clk1P22518 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.25□□□□□ -0.29
Clk1P22518 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Clk1P22518 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.25□□□□□ -0.29
Clk1P22518 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.25□□□□□ -0.29
Clk1P22518 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Clk1P22518 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Clk1P22518 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clk1P22518 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.24□□□□□ -0.29
Clk1P22518 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Clk1P22518 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clk1P22518 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.24□□□□□ -0.29
Clk1P22518 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Gm14042-201ENSMUST00000120139 833 ntBASIC13.24□□□□□ -0.29
Clk1P22518 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms