Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PdgfaP20033 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PdgfaP20033 Mir1895-201ENSMUST00000122615 79 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Gm7787-201ENSMUST00000216858 688 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.16□□□□□ -0.14
PdgfaP20033 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
PdgfaP20033 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfaP20033 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Celf4-206ENSMUST00000224553 1729 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.15□□□□□ -0.14
PdgfaP20033 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Gm13365-201ENSMUST00000121188 973 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.15□□□□□ -0.14
PdgfaP20033 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
PdgfaP20033 AA543401-201ENSMUST00000164248 1269 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.15□□□□□ -0.14
PdgfaP20033 Gm27321-201ENSMUST00000185021 205 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Gm18041-201ENSMUST00000218210 618 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.15□□□□□ -0.14
PdgfaP20033 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PdgfaP20033 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PdgfaP20033 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.15
PdgfaP20033 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Acot6-202ENSMUST00000222921 3622 ntBASIC14.14□□□□□ -0.15
PdgfaP20033 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PdgfaP20033 Gm18489-201ENSMUST00000172565 551 ntBASIC14.14□□□□□ -0.15
PdgfaP20033 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.14□□□□□ -0.15
PdgfaP20033 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
PdgfaP20033 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.14□□□□□ -0.15
PdgfaP20033 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PdgfaP20033 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.14□□□□□ -0.15
PdgfaP20033 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.13□□□□□ -0.15
PdgfaP20033 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PdgfaP20033 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdgfaP20033 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms