Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.97□□□□□ -0.81
Hbb-b1P02088 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Hbb-b1P02088 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Hbb-b1P02088 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.96□□□□□ -0.81
Hbb-b1P02088 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hbb-b1P02088 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gm9726-201ENSMUST00000180321 678 ntBASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Paupar-201ENSMUST00000194826 3482 ntBASIC9.96□□□□□ -0.82
Hbb-b1P02088 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hbb-b1P02088 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gm5643-201ENSMUST00000117081 966 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gm12441-201ENSMUST00000121806 588 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gm9172-201ENSMUST00000212092 954 ntBASIC9.95□□□□□ -0.82
Hbb-b1P02088 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hbb-b1P02088 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms