Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.86□□□□□ -0.35
DhfrP00375 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.86□□□□□ -0.35
DhfrP00375 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Psmb5-202ENSMUST00000227257 622 ntBASIC12.86□□□□□ -0.35
DhfrP00375 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DhfrP00375 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DhfrP00375 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.86□□□□□ -0.35
DhfrP00375 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.86□□□□□ -0.35
DhfrP00375 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DhfrP00375 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.85□□□□□ -0.35
DhfrP00375 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.85□□□□□ -0.35
DhfrP00375 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.85□□□□□ -0.35
DhfrP00375 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.85□□□□□ -0.35
DhfrP00375 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DhfrP00375 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
DhfrP00375 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.84□□□□□ -0.35
DhfrP00375 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
DhfrP00375 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
DhfrP00375 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.84□□□□□ -0.35
DhfrP00375 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Gm10499-201ENSMUST00000174094 934 ntBASIC12.84□□□□□ -0.35
DhfrP00375 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DhfrP00375 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DhfrP00375 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DhfrP00375 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
DhfrP00375 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms