Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.26■□□□□ 0.35
Cops6O88545 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cops6O88545 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cops6O88545 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.26■□□□□ 0.35
Cops6O88545 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.26■□□□□ 0.35
Cops6O88545 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cops6O88545 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cops6O88545 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Cops6O88545 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.25■□□□□ 0.35
Cops6O88545 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cops6O88545 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops6O88545 Gm27892-201ENSMUST00000185017 106 ntBASIC17.25■□□□□ 0.35
Cops6O88545 Gm44719-201ENSMUST00000206404 149 ntBASIC17.25■□□□□ 0.35
Cops6O88545 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.25■□□□□ 0.35
Cops6O88545 Mir497b-201ENSMUST00000093601 125 ntBASIC17.25■□□□□ 0.35
Cops6O88545 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.25■□□□□ 0.35
Cops6O88545 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cops6O88545 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cops6O88545 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cops6O88545 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.24■□□□□ 0.35
Cops6O88545 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Gm15824-201ENSMUST00000119516 955 ntBASIC17.24■□□□□ 0.35
Cops6O88545 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Gm24420-201ENSMUST00000176676 59 ntBASIC17.24■□□□□ 0.35
Cops6O88545 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Cops6O88545 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cops6O88545 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cops6O88545 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Gm11524-201ENSMUST00000119349 807 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.23■□□□□ 0.35
Cops6O88545 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Gm18062-201ENSMUST00000208020 547 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Gm18055-201ENSMUST00000208254 547 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.23■□□□□ 0.35
Cops6O88545 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cops6O88545 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Cops6O88545 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.23■□□□□ 0.35
Cops6O88545 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cops6O88545 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cops6O88545 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms