Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr1O70481 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr1O70481 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubr1O70481 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ubr1O70481 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.07■□□□□ 0.48
Ubr1O70481 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.07■□□□□ 0.48
Ubr1O70481 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ubr1O70481 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Gm11618-201ENSMUST00000117946 267 ntBASIC18.07■□□□□ 0.48
Ubr1O70481 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.07■□□□□ 0.48
Ubr1O70481 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.07■□□□□ 0.48
Ubr1O70481 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.07■□□□□ 0.48
Ubr1O70481 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.07■□□□□ 0.48
Ubr1O70481 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Ubr1O70481 Gm45841-201ENSMUST00000207700 164 ntBASIC18.07■□□□□ 0.48
Ubr1O70481 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Ubr1O70481 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubr1O70481 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.06■□□□□ 0.48
Ubr1O70481 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.06■□□□□ 0.48
Ubr1O70481 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubr1O70481 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubr1O70481 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.06■□□□□ 0.48
Ubr1O70481 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ubr1O70481 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.06■□□□□ 0.48
Ubr1O70481 Gm26315-201ENSMUST00000083890 321 ntBASIC18.06■□□□□ 0.48
Ubr1O70481 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ubr1O70481 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubr1O70481 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubr1O70481 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
Ubr1O70481 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC18.05■□□□□ 0.48
Ubr1O70481 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Ubr1O70481 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubr1O70481 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr1O70481 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubr1O70481 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ubr1O70481 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC18.04■□□□□ 0.48
Ubr1O70481 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm26927-201ENSMUST00000182385 965 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.04■□□□□ 0.48
Ubr1O70481 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr1O70481 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
Ubr1O70481 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms