Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.41□□□□□ -0.1
Limk2O54785 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Limk2O54785 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Limk2O54785 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Gm14719-201ENSMUST00000121891 340 ntBASIC14.41□□□□□ -0.1
Limk2O54785 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.41□□□□□ -0.1
Limk2O54785 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.41□□□□□ -0.1
Limk2O54785 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.41□□□□□ -0.1
Limk2O54785 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.41□□□□□ -0.1
Limk2O54785 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.41□□□□□ -0.1
Limk2O54785 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Limk2O54785 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Limk2O54785 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Limk2O54785 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limk2O54785 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Syt7-205ENSMUST00000224135 1557 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Limk2O54785 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.4□□□□□ -0.1
Limk2O54785 Gm16215-201ENSMUST00000161990 637 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Gm27680-201ENSMUST00000184192 160 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Gm44344-201ENSMUST00000200287 129 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.4□□□□□ -0.1
Limk2O54785 Gm44608-201ENSMUST00000206827 855 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Limk2O54785 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.4□□□□□ -0.1
Limk2O54785 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.4□□□□□ -0.1
Limk2O54785 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Limk2O54785 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Limk2O54785 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Limk2O54785 Gm15487-201ENSMUST00000122373 465 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.39□□□□□ -0.11
Limk2O54785 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Limk2O54785 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.39□□□□□ -0.11
Limk2O54785 Gm27533-201ENSMUST00000183800 152 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Gm27838-201ENSMUST00000184829 128 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Gm44855-201ENSMUST00000205725 362 ntBASIC14.39□□□□□ -0.11
Limk2O54785 Dupd1-202ENSMUST00000224735 548 ntBASIC14.39□□□□□ -0.11
Limk2O54785 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms