Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.9□□□□□ -0.34
Matn3O35701 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
Matn3O35701 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Matn3O35701 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Gm15165-201ENSMUST00000118140 502 ntBASIC12.9□□□□□ -0.34
Matn3O35701 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.9□□□□□ -0.34
Matn3O35701 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Matn3O35701 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.9□□□□□ -0.34
Matn3O35701 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.9□□□□□ -0.34
Matn3O35701 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Matn3O35701 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Matn3O35701 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Matn3O35701 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.9□□□□□ -0.34
Matn3O35701 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.9□□□□□ -0.34
Matn3O35701 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Matn3O35701 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Matn3O35701 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Matn3O35701 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Matn3O35701 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Matn3O35701 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.89□□□□□ -0.35
Matn3O35701 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Gm13464-201ENSMUST00000119418 935 ntBASIC12.89□□□□□ -0.35
Matn3O35701 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Gm27867-201ENSMUST00000184778 125 ntBASIC12.89□□□□□ -0.35
Matn3O35701 Gm18195-201ENSMUST00000207604 706 ntBASIC12.89□□□□□ -0.35
Matn3O35701 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.89□□□□□ -0.35
Matn3O35701 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Matn3O35701 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Matn3O35701 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Matn3O35701 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.88□□□□□ -0.35
Matn3O35701 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Matn3O35701 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.88□□□□□ -0.35
Matn3O35701 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Matn3O35701 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Matn3O35701 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms