Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col15a1O35206 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Col15a1O35206 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col15a1O35206 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Gm5940-201ENSMUST00000117582 1068 ntBASIC18■□□□□ 0.47
Col15a1O35206 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18■□□□□ 0.47
Col15a1O35206 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18■□□□□ 0.47
Col15a1O35206 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Gm7399-201ENSMUST00000032395 858 ntBASIC18■□□□□ 0.47
Col15a1O35206 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col15a1O35206 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col15a1O35206 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm42550-201ENSMUST00000201553 960 ntBASIC17.99■□□□□ 0.47
Col15a1O35206 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm19309-201ENSMUST00000218295 205 ntBASIC17.99■□□□□ 0.47
Col15a1O35206 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col15a1O35206 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.99■□□□□ 0.47
Col15a1O35206 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.99■□□□□ 0.47
Col15a1O35206 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.99■□□□□ 0.47
Col15a1O35206 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.99■□□□□ 0.47
Col15a1O35206 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col15a1O35206 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col15a1O35206 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col15a1O35206 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col15a1O35206 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Col15a1O35206 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.98■□□□□ 0.47
Col15a1O35206 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.98■□□□□ 0.47
Col15a1O35206 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.98■□□□□ 0.47
Col15a1O35206 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.98■□□□□ 0.47
Col15a1O35206 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.98■□□□□ 0.47
Col15a1O35206 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col15a1O35206 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.97■□□□□ 0.47
Col15a1O35206 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.97■□□□□ 0.47
Col15a1O35206 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.97■□□□□ 0.47
Col15a1O35206 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.97■□□□□ 0.47
Col15a1O35206 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col15a1O35206 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.97■□□□□ 0.47
Col15a1O35206 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col15a1O35206 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.97■□□□□ 0.47
Col15a1O35206 Gm29705-201ENSMUST00000212598 474 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms