Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trove2O08848 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trove2O08848 Gm7461-201ENSMUST00000058918 827 ntBASIC14.59□□□□□ -0.07
Trove2O08848 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
Trove2O08848 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trove2O08848 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.59□□□□□ -0.07
Trove2O08848 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.59□□□□□ -0.07
Trove2O08848 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trove2O08848 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.59□□□□□ -0.07
Trove2O08848 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trove2O08848 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trove2O08848 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trove2O08848 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trove2O08848 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Trove2O08848 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trove2O08848 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trove2O08848 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trove2O08848 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Trove2O08848 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trove2O08848 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Gm18733-201ENSMUST00000173950 856 ntBASIC14.58□□□□□ -0.08
Trove2O08848 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.58□□□□□ -0.08
Trove2O08848 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.58□□□□□ -0.08
Trove2O08848 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.58□□□□□ -0.08
Trove2O08848 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trove2O08848 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trove2O08848 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trove2O08848 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trove2O08848 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.57□□□□□ -0.08
Trove2O08848 Gm12350-201ENSMUST00000121208 462 ntBASIC14.57□□□□□ -0.08
Trove2O08848 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Gm27628-201ENSMUST00000184911 107 ntBASIC14.57□□□□□ -0.08
Trove2O08848 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trove2O08848 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.57□□□□□ -0.08
Trove2O08848 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.57□□□□□ -0.08
Trove2O08848 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.57□□□□□ -0.08
Trove2O08848 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trove2O08848 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trove2O08848 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.56□□□□□ -0.08
Trove2O08848 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.56□□□□□ -0.08
Trove2O08848 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trove2O08848 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms