Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.35■□□□□ 0.05
Ube3aO08759 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.35■□□□□ 0.05
Ube3aO08759 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube3aO08759 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ube3aO08759 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.35■□□□□ 0.05
Ube3aO08759 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ube3aO08759 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.35■□□□□ 0.05
Ube3aO08759 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube3aO08759 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.35■□□□□ 0.05
Ube3aO08759 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Ube3aO08759 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ube3aO08759 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ube3aO08759 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.34■□□□□ 0.05
Ube3aO08759 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.34■□□□□ 0.05
Ube3aO08759 Gm45747-201ENSMUST00000212203 999 ntBASIC15.34■□□□□ 0.05
Ube3aO08759 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.34■□□□□ 0.05
Ube3aO08759 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.34■□□□□ 0.05
Ube3aO08759 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ube3aO08759 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.34■□□□□ 0.05
Ube3aO08759 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.34■□□□□ 0.05
Ube3aO08759 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube3aO08759 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ube3aO08759 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube3aO08759 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube3aO08759 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ube3aO08759 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.33■□□□□ 0.05
Ube3aO08759 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.33■□□□□ 0.04
Ube3aO08759 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.33■□□□□ 0.04
Ube3aO08759 Gm10154-201ENSMUST00000084445 354 ntBASIC15.33■□□□□ 0.04
Ube3aO08759 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ube3aO08759 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.33■□□□□ 0.04
Ube3aO08759 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.33■□□□□ 0.04
Ube3aO08759 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ube3aO08759 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube3aO08759 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Ube3aO08759 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube3aO08759 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube3aO08759 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube3aO08759 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3aO08759 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms