Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Chrna9G3X8Z7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gm43474-201ENSMUST00000196415 774 ntBASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chrna9G3X8Z7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22065-201ENSMUST00000103753 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22066-201ENSMUST00000103761 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24932-201ENSMUST00000103763 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24115-201ENSMUST00000103799 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22190-201ENSMUST00000103827 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22191-201ENSMUST00000103831 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24721-201ENSMUST00000103849 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm28018-201ENSMUST00000103869 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm26399-201ENSMUST00000103937 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm5566-201ENSMUST00000116118 459 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm25349-201ENSMUST00000177728 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm23616-201ENSMUST00000177797 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm25871-201ENSMUST00000177816 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24752-201ENSMUST00000178240 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24496-201ENSMUST00000178287 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm25649-201ENSMUST00000178476 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm25548-201ENSMUST00000178681 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm23147-201ENSMUST00000178841 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm26095-201ENSMUST00000179270 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22171-201ENSMUST00000179283 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm23936-201ENSMUST00000179354 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm22619-201ENSMUST00000179516 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm25255-201ENSMUST00000179579 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm24755-201ENSMUST00000179691 110 ntBASIC15.21■□□□□ 0.03
Chrna9G3X8Z7 Gm26506-201ENSMUST00000179692 110 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms