Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim55G3X8Y1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.58□□□□□ -0.07
Trim55G3X8Y1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim55G3X8Y1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.58□□□□□ -0.08
Trim55G3X8Y1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim55G3X8Y1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.56□□□□□ -0.08
Trim55G3X8Y1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trim55G3X8Y1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms