Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a3E9PWQ3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Mir671-201ENSMUST00000102432 98 ntBASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Gm13611-201ENSMUST00000118269 318 ntBASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a3E9PWQ3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Mir6923-201ENSMUST00000184592 72 ntBASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm18734-201ENSMUST00000172937 808 ntBASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a3E9PWQ3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm6722-201ENSMUST00000221586 390 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col6a3E9PWQ3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms